Previous Article | Next Article 
Clinical Microbiology Reviews, January 1998, p. 202-227, Vol. 11, No. 1
0893-8512/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
Molecular Typing of Enteroviruses: Current Status
and Future Requirements
Peter
Muir,1,*
Ulrike
Kämmerer,2
Klaus
Korn,3
Mick N.
Mulders,4
Tuija
Pöyry,5
Benedikt
Weissbrich,6
Reinhard
Kandolf,2
Graham M.
Cleator,7 and
Anton M.
van Loon4,8,
for The European Union Concerted Action
on Virus Meningitis and Encephalitis
Department of Virology, United Medical and
Dental Schools of Guy's and St. Thomas's Hospitals,
London,1 and
Division of Virology,
University of Manchester Department of Pathological Sciences,
Manchester,7 United Kingdom;
Department
of Molecular Pathology, Institute of Pathology, University of
Tübingen, Tübingen,2
Institute for Clinical and Molecular Virology der
Friedrich-Alexander-Universität Erlangen-Nürnberg,
Erlangen,3 and
Institute for
Virology and Immunobiology, Universität Würzburg,
Würzburg,6 Germany;
Research
Laboratory for Infectious Diseases, National Institute of Public Health
and the Environment, Bilthoven,4 and
Department of Virology, Academic Hospital,
Utrecht,8 The Netherlands; and
Enterovirus Laboratory, National Public Health Institute,
Helsinki, Finland5
Human enteroviruses have traditionally been typed according to neutralization serotype. This procedure is limited by the difficulty in culturing some enteroviruses, the availability of antisera for serotyping, and the cost and technical complexity of serotyping procedures. Furthermore, the impact of information derived from enterovirus serotyping is generally perceived to be low. Enteroviruses are now increasingly being detected by PCR rather than by culture. Classical typing methods will therefore no longer be possible in most instances. An alternative means of enterovirus typing, employing PCR in conjunction with molecular genetic techniques such as nucleotide sequencing or nucleic acid hybridization, would complement molecular diagnosis, may overcome some of the problems associated with serotyping, and would provide additional information regarding the epidemiology and biological properties of enteroviruses. We argue the case for developing a molecular typing system, discuss the genetic basis of such a system, review the literature describing attempts to identify or classify enteroviruses by molecular methods, and suggest ways in which the goal of molecular typing may be realized.
*
Corresponding author. Mailing address: Department of
Virology, UMDS St. Thomas's Hospital, Lambeth Palace Rd., London SE1 7EH, United Kingdom. Phone: (44) 171 922 8167. Fax: (44) 171 922 8387. E-mail: p.muir{at}umds.ac.uk.
All authors are members of the European Union Concerted Action on
Virus Meningitis and Encephalitis. Other group members are listed in
the Appendix.
Clinical Microbiology Reviews, January 1998, p. 202-227, Vol. 11, No. 1
0893-8512/98/$04.00+0
Copyright © 1998, American Society for Microbiology. All rights reserved.
This article has been cited by other articles:
-
Tsai, M.-T., Cheng, Y.-H., Liu, Y.-N., Liao, N.-C., Lu, W.-W., Kung, S.-H.
(2009). Real-Time Monitoring of Human Enterovirus (HEV)-Infected Cells and Anti-HEV 3C Protease Potency by Fluorescence Resonance Energy Transfer. Antimicrob. Agents Chemother.
53: 748-755
[Abstract]
[Full Text]
-
Mirand, A., Henquell, C., Archimbaud, C., Chambon, M., Charbonne, F., Peigue-Lafeuille, H., Bailly, J.-L.
(2008). Prospective Identification of Enteroviruses Involved in Meningitis in 2006 through Direct Genotyping in Cerebrospinal Fluid. J. Clin. Microbiol.
46: 87-96
[Abstract]
[Full Text]
-
Nasri, D., Bouslama, L., Omar, S., Saoudin, H., Bourlet, T., Aouni, M., Pozzetto, B., Pillet, S.
(2007). Typing of Human Enterovirus by Partial Sequencing of VP2. J. Clin. Microbiol.
45: 2370-2379
[Abstract]
[Full Text]
-
Gersberg, R. M., Rose, M. A., Robles-Sikisaka, R., Dhar, A. K.
(2006). Quantitative Detection of Hepatitis A Virus and Enteroviruses Near the United States-Mexico Border and Correlation with Levels of Fecal Indicator Bacteria. Appl. Environ. Microbiol.
72: 7438-7444
[Abstract]
[Full Text]
-
Witso, E., Palacios, G., Cinek, O., Stene, L. C., Grinde, B., Janowitz, D., Lipkin, W. I., Ronningen, K. S.
(2006). High Prevalence of Human Enterovirus A Infections in Natural Circulation of Human Enteroviruses. J. Clin. Microbiol.
44: 4095-4100
[Abstract]
[Full Text]
-
Chen, T.-C., Chen, G.-W., Hsiung, C. A., Yang, J.-Y., Shih, S.-R., Lai, Y.-K., Juang, J.-L.
(2006). Combining Multiplex Reverse Transcription-PCR and a Diagnostic Microarray To Detect and Differentiate Enterovirus 71 and Coxsackievirus A16.. J. Clin. Microbiol.
44: 2212-2219
[Abstract]
[Full Text]
-
Freundt, E. C., Beatty, D. C., Stegall-Faulk, T., Wright, S. M.
(2005). Possible Tick-Borne Human Enterovirus Resulting in Aseptic Meningitis. J. Clin. Microbiol.
43: 3471-3473
[Abstract]
[Full Text]
-
Ginocchio, C. C., Zhang, F., Malhotra, A., Manji, R., Sillekens, P., Foolen, H., Overdyk, M., Peeters, M.
(2005). Development, Technical Performance, and Clinical Evaluation of a NucliSens Basic Kit Application for Detection of Enterovirus RNA in Cerebrospinal Fluid. J. Clin. Microbiol.
43: 2616-2623
[Abstract]
[Full Text]
-
Park, S.-W., Lee, C.-S., Jang, H.-C., Kim, E.-C., Oh, M.-d., Choe, K.-W.
(2005). Rapid Identification of the Coxsackievirus A24 Variant by Molecular Serotyping in an Outbreak of Acute Hemorrhagic Conjunctivitis. J. Clin. Microbiol.
43: 1069-1071
[Abstract]
[Full Text]
-
Elfaitouri, A., Mohamed, N., Fohlman, J., Aspholm, R., Frisk, G., Friman, G., Magnius, L., Blomberg, J.
(2005). Quantitative PCR-Enhanced Immunoassay for Measurement of Enteroviral Immunoglobulin M Antibody and Diagnosis of Aseptic Meningitis. CVI
12: 235-241
[Abstract]
[Full Text]
-
Papaventsis, D., Siafakas, N., Markoulatos, P., Papageorgiou, G. T., Kourtis, C., Chatzichristou, E., Economou, C., Levidiotou, S.
(2005). Membrane Adsorption with Direct Cell Culture Combined with Reverse Transcription-PCR as a Fast Method for Identifying Enteroviruses from Sewage. Appl. Environ. Microbiol.
71: 72-79
[Abstract]
[Full Text]
-
Bahri, O, Rezig, D, Nejma-Oueslati, B B., Yahia, A B., Sassi, J B., Hogga, N, Sadraoui, A, Triki, H
(2005). Enteroviruses in Tunisia: virological surveillance over 12 years (1992-2003). J Med Microbiol
54: 63-69
[Abstract]
[Full Text]
-
Lee, C., Lee, S.-H., Han, E., Kim, S.-J.
(2004). Use of Cell Culture-PCR Assay Based on Combination of A549 and BGMK Cell Lines and Molecular Identification as a Tool To Monitor Infectious Adenoviruses and Enteroviruses in River Water. Appl. Environ. Microbiol.
70: 6695-6705
[Abstract]
[Full Text]
-
Beld, M., Minnaar, R., Weel, J., Sol, C., Damen, M., van der Avoort, H., Wertheim-van Dillen, P., van Breda, A., Boom, R.
(2004). Highly Sensitive Assay for Detection of Enterovirus in Clinical Specimens by Reverse Transcription-PCR with an Armored RNA Internal Control. J. Clin. Microbiol.
42: 3059-3064
[Abstract]
[Full Text]
-
Lukashev, A. N., Lashkevich, V. A., Koroleva, G. A., Ilonen, J., Hinkkanen, A. E.
(2004). Recombination in uveitis-causing enterovirus strains. J. Gen. Virol.
85: 463-470
[Abstract]
[Full Text]
-
Bourlet, T., Caro, V., Minjolle, S., Jusselin, I., Pozzetto, B., Crainic, R., Colimon, R.
(2003). New PCR Test That Recognizes All Human Prototypes of Enterovirus: Application for Clinical Diagnosis. J. Clin. Microbiol.
41: 1750-1752
[Abstract]
[Full Text]
-
Craig, M. E., Robertson, P., Howard, N. J., Silink, M., Rawlinson, W. D.
(2003). Diagnosis of Enterovirus Infection by Genus-Specific PCR and Enzyme-Linked Immunosorbent Assays. J. Clin. Microbiol.
41: 841-844
[Abstract]
[Full Text]
-
Wang, J.-R., Tsai, H.-P., Huang, S.-W., Kuo, P.-H., Kiang, D., Liu, C.-C.
(2002). Laboratory Diagnosis and Genetic Analysis of an Echovirus 30-Associated Outbreak of Aseptic Meningitis in Taiwan in 2001. J. Clin. Microbiol.
40: 4439-4444
[Abstract]
[Full Text]
-
Manzara, S., Muscillo, M., La Rosa, G., Marianelli, C., Cattani, P., Fadda, G.
(2002). Molecular Identification and Typing of Enteroviruses Isolated from Clinical Specimens. J. Clin. Microbiol.
40: 4554-4560
[Abstract]
[Full Text]
-
Nijhuis, M., van Maarseveen, N., Schuurman, R., Verkuijlen, S., de Vos, M., Hendriksen, K., van Loon, A. M.
(2002). Rapid and Sensitive Routine Detection of All Members of the Genus Enterovirus in Different Clinical Specimens by Real-Time PCR. J. Clin. Microbiol.
40: 3666-3670
[Abstract]
[Full Text]
-
Oprisan, G., Combiescu, M., Guillot, S., Caro, V., Combiescu, A., Delpeyroux, F., Crainic, R.
(2002). Natural genetic recombination between co-circulating heterotypic enteroviruses. J. Gen. Virol.
83: 2193-2200
[Abstract]
[Full Text]
-
Manayani, D. J., Shaji, R. V., Fletcher, G. J., Cherian, T., Murali, N., Sathish, N., Solomon, T., Gnanamuthu, C., Sridharan, G.
(2002). Comparison of Molecular and Conventional Methods for Typing of Enteroviral Isolates. J. Clin. Microbiol.
40: 1069-1070
[Abstract]
[Full Text]
-
Wang, J.-R., Tuan, Y.-C., Tsai, H.-P., Yan, J.-J., Liu, C.-C., Su, I.-J.
(2002). Change of Major Genotype of Enterovirus 71 in Outbreaks of Hand-Foot-and-Mouth Disease in Taiwan between 1998 and 2000. J. Clin. Microbiol.
40: 10-15
[Abstract]
[Full Text]
-
Palacios, G., Casas, I., Tenorio, A., Freire, C.
(2002). Molecular Identification of Enterovirus by Analyzing a Partial VP1 Genomic Region with Different Methods. J. Clin. Microbiol.
40: 182-192
[Abstract]
[Full Text]
-
Bendig, J. W. A., O'Brien, P. S., Muir, P.
(2001). Serotype-Specific Detection of Coxsackievirus A16 in Clinical Specimens by Reverse Transcription-Nested PCR. J. Clin. Microbiol.
39: 3690-3692
[Abstract]
[Full Text]
-
Caro, V., Guillot, S., Delpeyroux, F., Crainic, R.
(2001). Molecular strategy for 'serotyping' of human enteroviruses. J. Gen. Virol.
82: 79-91
[Abstract]
[Full Text]
-
Georgopoulou, A., Markoulatos, P., Spyrou, N., Vamvakopoulos, N. C.
(2000). Improved Genotyping Vaccine and Wild-Type Poliovirus Strains by Restriction Fragment Length Polymorphism Analysis: Clinical Diagnostic Implications. J. Clin. Microbiol.
38: 4337-4342
[Abstract]
[Full Text]
-
Bailly, J.-L., Béguet, A., Chambon, M., Henquell, C., Peigue-Lafeuille, H.
(2000). Nosocomial Transmission of Echovirus 30: Molecular Evidence by Phylogenetic Analysis of the VP1 Encoding Sequence. J. Clin. Microbiol.
38: 2889-2892
[Abstract]
[Full Text]
-
Pevear, D. C., Tull, T. M., Seipel, M. E., Groarke, J. M.
(1999). Activity of Pleconaril against Enteroviruses. Antimicrob. Agents Chemother.
43: 2109-2115
[Abstract]
[Full Text]
-
Muir, P., Ras, A., Klapper, P. E., Cleator, G. M., Korn, K., Aepinus, C., Fomsgaard, A., Palmer, P., Samuelsson, A., Tenorio, A., Weissbrich, B., van Loon, A. M.
(1999). Multicenter Quality Assessment of PCR Methods for Detection of Enteroviruses. J. Clin. Microbiol.
37: 1409-1414
[Abstract]
[Full Text]
-
Byington, C. L., Taggart, E. W., Carroll, K. C., Hillyard, D. R.
(1999). A Polymerase Chain Reaction-based Epidemiologic Investigation of the Incidence of Nonpolio Enteroviral Infections in Febrile and Afebrile Infants 90 Days and Younger. Pediatrics
103: 27e-27
[Abstract]
[Full Text]
-
Gorgievski-Hrisoho, M., Schumacher, J.-D., Vilimonovic, N., Germann, D., Matter, L.
(1998). Detection by PCR of Enteroviruses in Cerebrospinal Fluid during a Summer Outbreak of Aseptic Meningitis in Switzerland. J. Clin. Microbiol.
36: 2408-2412
[Abstract]
[Full Text]