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Clinical Microbiology Reviews, April 2001, p. 244-269, Vol. 14, No. 2
0893-8512/01/$04.00+0   DOI: 10.1128/CMR.14.2.244-269.2001
Copyright © 2001, American Society for Microbiology. All rights reserved.

Wound Microbiology and Associated Approaches to Wound Management

P. G. Bowler,1,* B. I. Duerden,2,3 and D. G. Armstrong4,5

ConvaTec Global Development Center, Deeside, Flintshire,1 Department of Medical Microbiology, University of Wales College of Medicine, Cardiff,2 Public Health Laboratory Service, London,3 and Department of Medicine, Manchester Royal Infirmary, Manchester,4 United Kingdom, and Department of Surgery, Southern Arizona Veterans Affairs Medical Center, Tucson, Arizona5

SUMMARY
INTRODUCTION
WOUND TYPES
WOUND MICROBIOLOGY
    Microbial Colonization
    Factors Predisposing to Microbial Proliferation
    Wound Infection
        Surgical wound infections.
        Acute soft tissue infections.
        Bite wound infections.
        Burn wound infections.
        Diabetic foot ulcer infections.
        Leg and decubitus (pressure) ulcer infections.
    Significance of Microorganisms in Wounds
        Quantitative microbiology: significance of microbial numbers.
        Qualitative microbiology: significance of specific microorganisms.
MICROBIOLOGICAL ANALYSIS OF WOUNDS
    Wound-Sampling Methods
        Wound tissue sampling.
        Wound fluid sampling.
    Specimen Transport
    Analysis of Wound Specimens
        Gas-liquid chromatography for malodorous specimens.
        Gram stain.
        Culture of wound specimens.
        Reporting of microbiological results.
CONTROL OF MICROBIAL POPULATIONS IN WOUNDS
    Antimicrobial Methods of Treatment
        Antibiotics.
        (i) Acute wounds.
        (ii) Chronic wounds.
        (iii) Complementary therapy.
        (iv) Role of the microbiology laboratory in guiding antibiotic treatment in wound management.
        Antiseptics.
        Alternative antimicrobial therapies.
        Hyperbaric oxygen therapy.
    Nonantimicrobial Methods of Treatment
        Debridement.
        (i) Surgical debridement.
        (ii) Autolytic and enzymatic debridement.
        (iii) Biosurgical debridement.
        Pressure reduction in wounds.
        (i) Off-loading.
        (ii) Vacuum-assisted wound closure.
        Infection Control.
CONCLUSIONS
REFERENCES


SUMMARY
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The majority of dermal wounds are colonized with aerobic and anaerobic microorganisms that originate predominantly from mucosal surfaces such as those of the oral cavity and gut. The role and significance of microorganisms in wound healing has been debated for many years. While some experts consider the microbial density to be critical in predicting wound healing and infection, others consider the types of microorganisms to be of greater importance. However, these and other factors such as microbial synergy, the host immune response, and the quality of tissue must be considered collectively in assessing the probability of infection. Debate also exists regarding the value of wound sampling, the types of wounds that should be sampled, and the sampling technique required to generate the most meaningful data. In the laboratory, consideration must be given to the relevance of culturing polymicrobial specimens, the value in identifying one or more microorganisms, and the microorganisms that should be assayed for antibiotic susceptibility. Although appropriate systemic antibiotics are essential for the treatment of deteriorating, clinically infected wounds, debate exists regarding the relevance and use of antibiotics (systemic or topical) and antiseptics (topical) in the treatment of nonhealing wounds that have no clinical signs of infection. In providing a detailed analysis of wound microbiology, together with current opinion and controversies regarding wound assessment and treatment, this review has attempted to capture and address microbiological aspects that are critical to the successful management of microorganisms in wounds.


INTRODUCTION
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From a microbiological perspective, the primary function of normal, intact skin is to control microbial populations that live on the skin surface and to prevent underlying tissue from becoming colonized and invaded by potential pathogens. Exposure of subcutaneous tissue following a loss of skin integrity (i.e., a wound) provides a moist, warm, and nutritious environment that is conducive to microbial colonization and proliferation. However, the abundance and diversity of microorganisms in any wound will be influenced by factors such as wound type, depth, location, and quality, the level of tissue perfusion, and the antimicrobial efficacy of the host immune response. Whereas the microflora associated with clean, surgical wounds would be expected to be minimal, the presence of foreign material and devitalized tissue in a traumatic wound is likely to facilitate microbial proliferation unless early prophylactic antibiotic treatment and surgical debridement is implemented (201).

Since wound colonization is most frequently polymicrobial (25, 27, 44, 166, 226), involving numerous microorganisms that are potentially pathogenic, any wound is at some risk of becoming infected. In the event of infection, a wound fails to heal, the patient suffers increased trauma, treatment costs rise, and general wound management practices become more resource demanding. An analysis of postsurgical wound infections following head and neck surgery demonstrated an increase in the average hospitalization period from 14 days when wounds healed without complication to 24 days when the wounds became infected (118). In a similar analysis of 108 postsurgical wounds, Zoutman et al. (249) concluded that 10.2 days per case was directly attributable to wound infection and that the associated hospital cost was $3,937 per infected patient.

Thus, concern among health care practitioners regarding the risk of wound infection is justifiable not only in terms of increased trauma to the patient but also in view of its burden on financial resources and the increasing requirement for cost-effective management within the health care system. From a clinical perspective, fears associated with wound infection have paralleled the increasing use of occlusive dressings since the 1960s. The primary function of dressings such as polyurethane films, polyurethane foams, and hydrocolloids is to maintain a moist and optimal environment for wound healing. Although they have been reported to encourage microbial proliferation in wounds (95, 128), the infection rate is lower under occlusive dressings than under conventional dry dressings (24, 113) and wound healing is not impaired (95).

Although microorganisms are responsible for wound infection, widespread controversy still exists regarding the exact mechanisms by which they cause infection and also their significance in nonhealing wounds that do not exhibit clinical signs of infection. One school of thought is that the density of microorganisms is the critical factor in determining whether a wound is likely to heal (100, 102, 151, 196, 202). However, a second school of thought argues that the presence of specific pathogens is of primary importance in delayed healing (59, 130, 149, 181, 216, 217), while yet others have reported microorganisms to be of minimal importance in delayed healing (4, 70, 80, 95, 98, 214, 237).

There is also debate about whether a wound should be sampled for culture, the value of wound sampling in determining the cause of infection and subsequent treatment, and the sampling technique required to provide the most meaningful data. Regarding the role of the microbiology laboratory, consideration must be given to the relevance of culturing polymicrobial specimens, the value of identifying one or more microorganisms, and which microorganisms (if any) should be assayed for antibiotic susceptibility. By questioning and justifying the need to sample and perform microbiological analyses on any problematic wound, long-term savings in cost, labor, and time to both the wound management team and the microbiology laboratory could be considerable. In this respect, the value of the Gram stain as a quick and inexpensive additional or alternative test is also worthy of consideration.

Although appropriate systemic antibiotics are considered essential for the treatment of nonhealing, clinically infected wounds, there is debate about the relevance and use of systemic and topical antibiotics and of topical antiseptics in the treatment of nonhealing, noninfected wounds. Other, nonmicrobiological approaches to controlling potentially pathogenic microbial populations in wounds must also be considered part of a multidisciplinary wound management effort.

In view of the fears, uncertainties, and controversies regarding the role of microorganisms in wounds, this review aims to capture current opinion, evaluate the role of the microbiologist and the microbiology laboratory in wound management, and clarify the relevance of treatment and treatment options in controlling microbial colonization and infection in wounds.


WOUND TYPES
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Wounds can be broadly categorized as having either an acute or a chronic etiology. Acute wounds are caused by external damage to intact skin and include surgical wounds, bites, burns, minor cuts and abrasions, and more severe traumatic wounds such as lacerations and those caused by crush or gunshot injuries (60). Irrespective of the nature of the cutaneous injury, acute wounds are expected to heal within a predictable time frame, although the treatment required to facilitate healing will vary according to the type, site, and depth of a wound. The primary closure of a clean, surgical wound would be expected to require minimal intervention to enable healing to progress naturally and quickly. However, in a more severe traumatic injury such as a burn wound or gunshot wound, the presence of devitalized tissue and contamination with viable (e.g., bacterial) and nonviable foreign material is likely to require surgical debridement and antimicrobial therapy to enable healing to progress through a natural series of processes, including inflammation and granulation, to final reepithelialization and remodeling.

In marked contrast, chronic wounds are most frequently caused by endogenous mechanisms associated with a predisposing condition that ultimately compromises the integrity of dermal and epidermal tissue (60). Pathophysiological abnormalities that may predispose to the formation of chronic wounds such as leg ulcers, foot ulcers, and pressure sores include compromised tissue perfusion as a consequence of impaired arterial supply (peripheral vascular disease) or impaired venous drainage (venous hypertension) and metabolic diseases such as diabetes mellitus. Advancing age, obesity, smoking, poor nutrition, and immunosuppression associated with disease (e.g., AIDS) or drugs (e.g., chemotherapy or radiation therapy) may also exacerbate chronic ulceration. Pressure or decubitus ulcers have a different etiology from other chronic wounds in that they are caused by sustained external skin pressure, most commonly on the buttocks, sacrum, and heels. However, the underlying pathology often contributes to chronicity, and in this situation, pressure sores, like all chronic wound types, heal slowly and in an unpredictable manner.


WOUND MICROBIOLOGY
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Microbial Colonization

Exposed subcutaneous tissue provides a favourable substratum for a wide variety of microorganisms to contaminate and colonize, and if the involved tissue is devitalized (e.g., ischemic, hypoxic, or necrotic) and the host immune response is compromised, the conditions become optimal for microbial growth. Wound contaminants are likely to originate from three main sources: (i) the environment (exogenous microorganisms in the air or those introduced by traumatic injury), (ii) the surrounding skin (involving members of the normal skin microflora such as Staphylococcus epidermidis, micrococci, skin diphtheroids, and propionibacteria), and (iii) endogenous sources involving mucous membranes (primarily the gastrointestinal, oropharyngeal, and genitourinary mucosae) (65). The normal microfloras of the gut, the oral cavity, and the vagina are both diverse and abundant, and these sources (particularly the oral and gastrointestinal mucosae) supply the vast majority of microorganisms that colonize wounds. Detailed microbiological analyses of wounds demonstrate close correlations between the species found in the normal flora of the gut or oral cavity and microorganisms present in wounds in close proximity to those sites (33-35, 43, 46). Whereas a minor, healing wound may allow sufficient time for a only relatively small number of skin contaminants to take residence, the continued exposure of devitalized tissue associated with a slowly healing chronic wound is likely to facilitate the colonization and establishment of a wide variety of endogenous microorganisms. Dental plaque, the gingival crevice, and the contents of the colon contain approximately 1011 to 1012 microorganisms/g of tissue, of which, up to 90% of the oral microflora (16) and up to 99.9% of the colonic microflora (105) are anaerobes. In view of this situation, it is reasonable to predict that wounds with a sufficiently hypoxic and reduced environment are susceptible to colonization by a wide variety of endogenous anaerobic bacteria. However, to date, widespread opinion among wound care practitioners is that aerobic or facultative pathogens such as Staphylococcus aureus, Pseudomonas aeruginosa, and beta-hemolytic streptococci are the primary causes of delayed healing and infection in both acute and chronic wounds. Such opinion has been formed on the basis of referenced comments and studies performed largely during the last two decades that have investigated the role of microorganisms in wound healing (58, 59, 81, 94, 146, 182, 216, 217, 238; D. J. Leaper, Editorial, J. Wound Care 7:373, 1998). A common oversight in these and other studies and opinions is that the culture and isolation of anaerobic bacteria was minimal or omitted, whereas when wounds are investigated by appropriate microbiological techniques anaerobes are found to form a significant proportion of the microbial population in both acute and chronic wounds (25, 27, 28, 33-38, 41-45, 64, 80, 98, 143, 166, 185, 213, 226). On the basis of the studies reviewed in Table 1, which involved detailed microbiological analyses of clinically noninfected (i.e., colonized) wounds of varied etiology, anaerobes constituted, on average, 38% of the total number of microbial isolates per study. It should be emphasized that the studies reported did not investigate specifically the effect of microorganisms on wound healing.

                              
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TABLE 1.   Studies involving a detailed analysis of the aerobic and anaerobic microbiology of noninfected wounds without specifically investigating the role of microorganisms in wound healing

Recognition of the fact that anaerobes are too often overlooked, although many are potentially highly virulent, has led experts in the field to define members of this group of bacteria as being "the secret pathogens" (74) and "invisible villains" (18). Nichols and Smith (175) reported that endogenous anaerobic bacteria were the likely cause of postoperative infections when wound specimens failed to yield bacterial growth on routine culture.

The failure to recognise the prevalence of anaerobic bacteria in wounds may be due to several reasons. (i) Anaerobes are not regarded as being detrimental to normal wound healing (70, 80, 150, 217). (ii) Compared with aerobic and facultative microorganisms, the culture, isolation, and identification of anaerobic bacteria is more time-consuming, labor-intensive, and expensive and is often deemed to be too demanding for many diagnostic microbiology laboratories. The relevance of culturing specimens for anaerobic bacteria is discussed in "Microbiological analysis of wounds" below. (iii) Since anaerobes are often perceived to die rapidly in air, the method of specimen collection and transportation to the laboratory is assumed to be critical for maintaining viability and for effective culture. However, many of the frequent wound colonizers, including Bacteroides, Prevotella, Porphyromonas, and Peptostreptococcus spp., will survive for several days in the presence of air (17, 26, 99, 142). Consequently, the methods for sampling and transportation are probably less critical than the microbiological methods used to ensure effective isolation of anaerobic bacteria. However, this does not imply that specimen collection and transport should be performed without the utmost care and meticulous procedures.

Both acute and chronic wounds are susceptible to contamination and colonization by a wide variety of aerobic and anaerobic microorganisms, as indicated in Table 2.

                              
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TABLE 2.   Aerobic and anaerobic isolates from acute and chronic wounds of varied etiologya,b

Factors Predisposing to Microbial Proliferation

Surgical wounds will heal rapidly if blood perfusion is maximized, thus delivering oxygen, nutrients, and cells of the immune system to the site of injury and providing minimal opportunity for microorganisms to colonize and proliferate (110). This situation is exemplified by wounds in the anus, which, despite being susceptible to gross microbial contamination, are very well perfused and rarely become infected (110). The probability of wound healing is extremely high if the tissue oxygen tension (pO2) is >40 mm Hg, but healing is unlikely to occur at levels of <20 mm Hg (110). In well-perfused periwound tissue, reported oxygen tensions of 60 to 90 mm Hg compare with levels of near zero in central dead wound space (176).

In contrast, chronic, nonhealing wounds are frequently hypoxic (218) as a consequence of poor blood perfusion (ischemia), and host and microbial cell metabolism contributes further to a lowering of the local pO2. Oxygen tensions of between 5 and 20 mm Hg have been recorded in nonhealing wounds (218), and values of less than 30 mm Hg have been recorded in infected and traumatized tissue (164); this correlates with a reported pO2 requirement of approximately 30 mm Hg for active cell division (111). Thus, cell death and tissue necrosis caused by tissue hypoxia or anoxia are likely to create ideal growth conditions for members of the wound microflora, including fastidious anaerobes that will proliferate as residual oxygen is consumed by facultative bacteria. Such interaction between microorganisms was recognized as long ago as 1915 by Alexander Fleming in his studies on gunshot wounds during the First World War (63). As well as being essential for cell growth and wound healing, oxygen is a critical component of the respiratory burst activity in polymorphonuclear leukocytes (PMNs), resulting in the intracellular production of highly potent antimicrobial metabolites. A significant reduction in the killing capacity of PMNs at a pO2 of <30 mm Hg has been reported (107), and in this respect, poorly perfused wound tissue is considered to be far more susceptible to infection than are wounds involving well-perfused tissue (176).

Although many endogenous anaerobes survive prolonged periods of exposure to air (17, 26, 99, 142, 230) and tolerate oxygen tensions up to 60 mm Hg (8% oxygen) (184), the redox (oxidation-reduction) potential (Eh) of tissue is also important for their survival (11). Generally, a low Eh (measured in millivolts) favors the growth of anaerobic bacteria, as demonstrated in the colon, where values can be as low as -250 mV, compared with approximately +150 mV in normal tissue and up to +250 mV in circulating blood. Although some anaerobes have been reported to survive in an aerated broth culture medium that was maintained at low Eh (73), other investigations have demonstrated that several intestinal pathogens (Clostridium perfringens, Bacteroides fragilis, and Peptostreptococcus magnus) were inhibited in the presence of oxygen at an Eh of -50 mV (73). Also, the tolerance of anaerobes to Eh is influenced by pH, as demonstrated by C. perfringens, which has a growth-limiting Eh of +30 mV at pH 7.8 but can survive at +250 mV at pH 6.0 (73).

Although opinion is conflicting regarding the importance of the redox potential in supporting the growth of anaerobic bacteria, a wound environment that has a low oxygen tension (hypoxia or anoxia) and a low redox potential will facilitate the development of polymicrobial aerobic-anaerobic populations.

Wound Infection

Infection occurs when virulence factors expressed by one or more microorganisms in a wound outcompete the host natural immune system and subsequent invasion and dissemination of microorganisms in viable tissue provokes a series of local and systemic host responses. Characteristic local responses are a purulent discharge or painful spreading erythema indicative of cellulitis around a wound (186). The progression of a wound to an infected state is likely to involve a multitude of microbial and host factors, including the type, site, size, and depth of the wound, the extent of nonviable exogenous contamination, the level of blood perfusion to the wound, the general health and immune status of the host, the microbial load, and the combined level of virulence expressed by the types of microorganisms involved. Most acute and chronic wound infections involve mixed populations of both aerobic and anaerobic microorganisms, and this is demonstrated in Table 3, which collates some of the published literature regarding the microbiology of a variety of infected wound types.

                              
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TABLE 3.   Studies involving a detailed microbiological analysis of the aerobic and anaerobic microbiology of infected wounds

The overall average percent frequencies of anaerobic bacteria in noninfected and infected wounds, based on data presented in Tables 1 and 3, are 38 and 48%, respectively. These numbers compare very closely with those observed by Bowler and Davies (28) specifically in noninfected and infected leg ulcers (36 and 49%, respectively); a correlation between the incidence of anaerobic bacteria and wound infection is thus evident.

Surgical wound infections. The risk of infection is generally based on the susceptibility of a surgical wound to microbial contamination (196). Clean surgery carries a 1 to 5% risk of postoperative wound infection, and in dirty procedures that are significantly more susceptible to endogenous contamination, a 27% risk of infection has been estimated (174). The Guideline for Prevention of Surgical Site Infection, 1999 issued by the Centers for Disease Control and Prevention classified surgical wound infections as being either incisional (involving skin, subcutaneous tissue, or deeper fascia and muscle tissue) or organ/space, involving any internal organs or anatomical spaces (151). Examples of the latter include surgery associated with the large intestine and the head and neck, where extensive endogenous wound contamination, and hence a higher probability of wound infection, is likely.

With the exception of clean operative procedures, surgical wound infections are recognized as having a polymicrobial etiology, involving both aerobic and anaerobic microorganisms (Table 3) (2, 35, 36, 38, 64, 175, 212), and intra-abdominal infections normally reflect the microflora of the resected organ (34, 175). Reported wound infection rates following orthopedic surgery are relatively low (2 to 6.8%) (20, 61, 223), and similar studies, involving a large number of generalized postoperative wound types, have reported overall infection rates of 3.4% in 5,129 operations (1), 4.7% in 62,939 operations (57), and 9.4% in 1,770 operations (238). In the last two studies, the infection rates ranged from 1.5% (57) and 5.9% (238) following clean surgery to 40% (57) and 52.9% (238) following contaminated surgery. Despite the frequency and prevalence of endogenous anaerobes in surgical wound infections (Table 3), the Centers for Disease Control and Prevention guideline for the prevention of surgical site infection has recognized S. aureus, coagulase-negative staphylococci, Enterococcus spp., Escherichia coli, P. aeruginosa, and Enterobacter spp. as the most frequently isolated pathogens (151). Unfortunately, this view has been based on only two published reports that provided no indication of the inclusion of anaerobic bacteriology in the associated studies, and hence the data may have been biased in favor of aerobic and facultative microorganisms (50, 154). In contrast, Rotstein et al. (207) emphasized the polymicrobial nature of almost all surgical infections and commented that the critical importance of aerobic-anaerobic mixtures in these infections had received relatively little attention.

Minimizing the incidence of postoperative wound infection relies on adequate asepsis and antisepsis and preservation of the local host defenses (109). Asepsis involves the utilization of effective infection control procedures (e.g., air filtration, skin barrier garments, disinfection) to minimize exogenous microbial contamination during surgery. Antisepsis involves the use of skin antiseptics on the operative site and also, in the case of dirty surgical procedures, administration of prophylactic antibiotics at a time point just prior to surgery that will ensure adequate tissue levels of antibiotic during surgery. As part of the surgical procedure, endogenous and exogenous microbial contamination must be minimized by ensuring good aseptic, skilled surgical techniques and minimizing the duration of surgery, while also optimizing the local wound conditions (97). This primarily involves removing any devitalized tissue to reestablish blood flow to the wound area (2), thereby maintaining adequate perfusion to enable the delivery of immune cells, oxygen, and nutrients and reducing the microbial load.

Acute soft tissue infections. Acute soft tissue infections include cutaneous abscesses, traumatic wounds, and necrotizing infection. Microbiological investigations have shown that S. aureus is the single causative bacterium in approximately 25 to 30% of cutaneous abscesses (41, 158), and the same organism has also been recognized as being the most frequent isolate in superficial infections seen in hospital Accident and Emergency Departments (180). However, other studies have demonstrated that approximately 30 to 50% of cutaneous abscesses (41, 42, 226), 50% of traumatic injuries of varied etiology (40, 45), and 47% of necrotizing soft tissue infections (69) have a polymicrobial aerobic-anaerobic microflora.

Necrotizing soft tissue infections occur with different degrees of severity and speed of progression; they involve the skin (e.g., clostridial and nonclostridial anaerobic cellulitis), subcutaneous tissue to the muscle fascia (necrotizing fasciitis), and muscle tissue (streptococcal myositis and clostridial myonecrosis). S. aureus has been described as being the single pathogen in two patients with rapidly progressing necrotizing fasciitis of the lower extremity (199), and in a study of necrotizing fasciitis in eight children, Brook (40) reported the presence of pure Streptococcus pyogenes in two patients and a mixed predominance of Peptostreptococcus spp., S. pyogenes, B. fragilis, C. perfringens, E. coli, and Prevotella spp. in the others. Potentiation of infection by microbial synergistic partnerships between aerobes, such as S. aureus and S. pyogenes, and nonsporing anaerobes has been recognized in various types of nonclostridial cellulitis and necrotizing fasciitis (40, 122).

The classification of necrotizing soft tissue infections is complex and is based on (i) the assumed causative microorganism(s), (ii) the initial clinical findings, (iii) the type and level of tissue involved, (iv) the rate of progression, and (v) the type of therapy required (12). However, Elliot et al. (69) argued that the classification of such infections serves little clinical purpose because the prognosis and treatment are the same and, consequently, differentiation is required only between pure clostridial myonecrosis (since it involves muscle invasion and is associated with a higher mortality rate) and other non-muscle-associated soft tissue infections.

The management of necrotizing soft tissue infections requires early diagnosis, aggressive and, if necessary, repeated debridement, and antibiotic therapy (12, 69, 191). Hyperbaric oxygen (HBO) therapy is also believed by many to facilitate wound healing (12, 69), although its use is controversial (53, 69, 165). HBO therapy is discussed in more detail in "Control of microbial populations in wounds" (below). The pilonidal sinus is another type of acute wound that is susceptible to fecal contamination and infection; Bascom (18) reported that anaerobes were the true and invisible causative microorganisms. Surgical reshaping of the wound to provide improved oxygenation is often required (18).

Bite wound infections. The reported infection rate for human bite wounds ranges from 10 to 50% depending on the severity and location of the bite, and up to 20% of dog bites and 30 to 50% of cat bites become infected (92). Brook (33) reported that 74% of 39 human and animal bite wounds contained a polymicrobial aerobic-anaerobic microflora, with S. aureus, Peptostreptococcus spp., and Bacteroides spp. being the predominant isolates in both wound types.

Due to the complex nature of the oral microflora in humans and animals, the majority of bite wounds harbor potential pathogens, many of which are anaerobes. As well as the common anaerobes in both human and animal bite wounds, such as Bacteroides, Prevotella, Porphyromonas, and Peptostreptococcus spp. (83), less common potential pathogens such as Pasteurella multocida, Capnocytophaga canimorsus, Bartonella henselae, and Eikenella corrodens may also be involved (75).

Management of bite wounds is likely to involve high-pressure irrigation to reduce the microbial load, debridement of devitalized tissue, and antibiotic treatment for high-risk wounds such as punctures (75, 82).

Burn wound infections. Infection is a major complication in burn wounds, and it is estimated that up to 75% of deaths following burn injury are related to infection (200, 239). Although exposed burned tissue is susceptible to contamination by microorganisms from the gastrointestinal and upper respiratory tracts (239), many studies have reported the prevalence of aerobes such as P. aeruginosa, S. aureus, E. coli, Klebsiella spp., Enterococcus spp., and Candida spp. (13, 132, 154, 200, 239). In other studies involving more stringent microbiological techniques, anaerobic bacteria have been shown to represent between 11 and 31% of the total number of microbial isolates from burn wounds (46, 166, 197). While the aerobes isolated in the latter studies were similar to those reported previously, predominant anaerobic burn wound isolates were Peptostreptococcus spp., Bacteroides spp., and Propionibacterium acnes (46, 166). Mousa (166) also reported the presence of Bacteroides spp. in the wounds of 82% of patients who developed septic shock and concluded that such microorganisms may play a significant role in burn wound sepsis.

Management of infection in burn wounds involves the use of topical and systemic antimicrobial agents, aggressive debridement of dead tissue, maximization of the immune response, and provision of adequate nutrition (147).

Diabetic foot ulcer infections. Plantar ulcers associated with diabetes mellitus are susceptible to infection due to the high incidence of mixed wound microflora (62) and the inability of the PMNs to deal with invading microorganisms effectively (8). However, with optimal treatment involving debridement of devitalized tissue, the use of appropriate dressings, and pressure relief, wound infection can be minimized. Boulton et al. (24) reported an infection rate of 2.5% in diabetic wounds treated with a moisture-retentive hydrocolloid dressing, compared with a 6% infection rate under a traditional gauze dressing. Laing (127) also observed a similar infection rate (2%) in diabetic foot ulcers treated with a hydrocolloid dressing, despite the number of species increasing during treatment.

As in most wound types, S. aureus is a prevalent isolate in diabetic foot ulcers, together with other aerobes including S. epidermidis, Streptococcus spp., P. aeruginosa, Enterococcus spp., and coliform bacteria (8, 121, 185). With good microbiological techniques, anaerobes have been isolated from up to 95% of diabetic wounds (78), the predominant isolates being Peptostreptococcus, Bacteroides, and Prevotella spp. (62, 78, 116, 121, 243). In view of the polymicrobial nature of diabetic foot ulcers, Karchmer and Gibbons (121) questioned the need for precisely defining the causative microorganism(s) and suggested that the treatment of infection could be based on a better understanding of the general microbiology of these wounds. Armstrong et al. (8) supported this view by commenting that repetitive cultures following initial culture and subsequent treatment do not confirm or rule out the presence of infection and, consequently, that the foot infection must be diagnosed primarily on clinical grounds.

Leg and decubitus (pressure) ulcer infections. The microflora of chronic venous leg ulcers is frequently polymicrobial, and anaerobes have been reported to constitute approximately 30% of the total number of isolates in noninfected wounds (28, 42, 98). Although S. aureus is the most prevalent potential pathogen in leg ulcers (28, 42, 98), Bowler and Davies (28) reported a significantly greater frequency of anaerobes (particularly Peptostreptococcus spp. and pigmenting and nonpigmenting gram-negative bacilli) in clinically infected leg ulcers than in noninfected leg ulcers (49 versus 36% of the total numbers of microbial isolates, respectively). The same investigators also suggested that aerobic-anaerobic synergistic interactions are likely to be more important than specific microorganisms in the pathogenesis of leg ulcer infection; this mechanism is not widely recognized in the management of surgical (207) and chronic wound infections.

Decubitus ulcers develop as a consequence of continued skin pressure over bony prominences; they lead to skin erosion, local tissue ischemia, and necrosis, and those in the sacral region are particularly susceptible to fecal contamination. Approximately 25% of decubitus ulcers have underlying osteomyelitis (47), and bacteremia is also common (128). One of the few reported acknowledgments of the role of polymicrobial synergy in chronic wound infection was made by Kingston and Seal (122), who commented that since the bacteriology of decubitus ulcers is similar to that of some of the acute necrotizing soft tissue infections, the anaerobic and aerobic bacteria involved are likely to contribute to the deterioration of a lesion. The opportunity for microbial synergy in many decubitus ulcers was demonstrated by Brook (37), who reported mixed aerobic and anaerobic microflora in 41% of 58 ulcers in children; S. aureus, Peptostreptococcus spp., Bacteroides spp. (formerly members of the B. fragilis group), and P. aeruginosa were the predominant isolates. Although localized wound care is normally sufficient to facilitate primary healing in decubitus ulcers, occasional necrosis of adjacent soft tissues leading to necrotizing fasciitis has been reported (120).

Initial management of infected decubitus ulcers normally involves aggressive surgical debridement and broad-spectrum antimicrobial coverage (128). Although leg ulcers frequently display a dense microflora, the occurrence of infection is relatively low (<5%) (113); however, again, treatment normally includes topical and systemic antimicrobial agents and surgical debridement as necessary.

Significance of Microorganisms in Wounds

Quantitative microbiology: significance of microbial numbers. The clinical significance of the microbial load in delaying wound healing was described in 1964 by Bendy et al. (19), who reported that healing in decubitus ulcers progressed only when the bacterial load was <106 CFU/ml of wound fluid. In this study, quantification was determined by using superficial wound swab samples. Similar observations, placing emphasis on counts in tissue biopsy specimens, were reported in studies involving skin graft survival in experimental wounds inoculated with various types of bacteria (126), pressure ulcer healing (203), and delayed closure of surgical wounds (204, 205). Aligned with this early work and in recognition of the fact that quantitative culture of tissue biopsy specimens was demanding on the microbiology laboratory (102) and was of minimal value in facilitating prompt wound management (202), a rapid Gram stain technique was shown to reliably predict a microbial load of >105 CFU/g of tissue if a single microorganism was seen on the slide preparation (102). Additionally, Levine et al. (139) consistently demonstrated a microbial load of >= 106 organisms per quantitative swab sample taken from open burn wounds when bacterial cells were observed in a Gram-stained smear prepared from the same sample (139). The work of Robson and Heggers, in particular, has spanned more than three decades, and on the basis of their (and other) observations, one school of thought believes that acute or chronic wound infection exists when the microbial load is >105 CFU/g of tissue. More recently, Breidenbach and Trager (31) demonstrated that a critical level of bacteria of >= 104 CFU/g of tissue must be reached to cause infection in complex extremity wounds and that quantitative tissue cultures predict the likelihood of wound infection more effectively than swab cultures do. In contrast, Pruitt et al. (194) reported that quantitative cultures are incapable of differentiating between burn wound colonization and infection, and they described histological analysis as being the most effective and rapid method for determining invasive burn wound infection. Raahave et al. (196), using a velvet pad surface imprint technique, reported that the median infective dose of mixed aerobes and anaerobes in postsurgical wounds was 4.6 × 105 CFU/cm2, and Majewski et al. (150), using a surface swab method, demonstrated that skin grafting was more successful in patients with wound contamination of <5 × 104 CFU/cm2. A dermabrasion technique, considered to quantify tissue colonization while minimizing the degree of tissue invasion in burn wounds, has been shown to be more sensitive, both qualitatively and quantitatively, than a surface sample procedure (181). However, the technique requires specialized equipment, and the work of Pallua et al. (181) excluded investigation for anaerobic bacteria.

The quantitative studies described in the literature can be broadly differentiated on the basis of those that used surface sampling techniques and those that used deep-tissue biopsy techniques. Robson and Heggers argue strongly that deep-tissue biopsies are essential to quantify and determine the causative (invasive) microorganisms in wound infection. However, noninvasive techniques have also been shown to be beneficial in determining the numbers of microorganisms that are likely to interfere with wound healing or cause infection. The value of superficial cultures in wound assessment has been questioned, and Robson (201) stated that purulent wound fluid may fail to yield microorganism growth whereas biopsied tissue may yield significant numbers of bacteria if such cultures were performed routinely. However, it should be borne in mind that with the exception of deep surgical wounds involving internal organs, wound contamination by members of the endogenous microflora will occur from sources external to the wound. Thus, superficial tissue is likely to harbor a diversity of aerobic and anaerobic microorganisms, one or more of which may invade deeper tissue, and it is highly unlikely that superficial tissue will be "sterile" while deeper tissue is "infected." Most wounds are colonized with microorganisms, and a failure to isolate them is more likely to be a consequence of poor microbiological technique, particularly in the case of anaerobes.

Thus, quantitative analysis of superficial tissue may also have a role to play in predicting the risk of wound infection (150, 196), and several studies have demonstrated a correlation between surface cultures and tissue biopsy cultures. Levine et al. (139) demonstrated a close correlation between quantitative swab and tissue biopsy specimen counts in open burn wounds, and Armstrong et al. (8) observed no difference in the isolation rate of microorganisms from deep tissue and superficial curettage in 112 diabetic foot ulcer infections. In an experimental rat model, Bornside and Bornside (23) demonstrated that a tissue count of 105 CFU/g was equivalent to a 103 CFU/ml count obtained from a moist swab and concluded that the moist swab provides a direct and simple method for ascertaining infection. Similarly, Thomson (235) demonstrated a correlation between a semiquantitative surface swab count (1+ to 4+) and a fully quantitative biopsy specimen count in burn wounds; 1+ growth from a swab correlated with a tissue count of 102 to 103 CFU/g, and 4+ correlated with a tissue count of approximately 107 CFU/g. Lawrence (132) also commented that quantitative bacteriology for burn wounds provides little information beyond that obtained from a surface swab, and swabs that yield more than 30 CFU reliably indicate a tissue count of >105 CFU/g. Also, Vindenes and Bjerknes (239) concluded that invasive microorganisms in burn wounds mirror those found in swab cultures of superficial tissue. A comparison of studies reported by Bowler and Davies (28) and Sapico et al. (214) also demonstrates a close correlation between the isolation of microorganisms in superficial and deep tissue. The microbiology of infected leg ulcers investigated by a surface-swabbing procedure demonstrated mean isolation rates of 2.6 aerobes and 2.5 anaerobes per wound (28), which compares with deep-tissue biopsy specimen mean isolation rates of 2.3 aerobes and 2.4 anaerobes per infected diabetic ulcer (214).

In another study, no relationship was shown between the density of microorganisms in deep tissue and the eventual outcome of myocutaneous rotation flap surgery in pressure sores (213), and Hansson (98) concluded that the number of microorganisms or number of species present in 58 non-clinically infected leg ulcers had no effect on wound healing.

Another factor that must be taken into consideration when relying on quantitative cultures to determine the likelihood of wound healing is the distribution of microorganisms within wound tissue. In an evaluation of the microbial distribution in tissue taken from seven decubitus ulcers, Schneider et al. (215) concluded that on the basis of the variability of counts obtained from a single tissue biopsy specimen, a bacterial count at a single location has limited value in determining the optimal time required to perform a wound closure. Similarly, Sapico et al. (213) reported only a 63% concordance between quantitative results from biopsy specimens taken from the periphery and center of 25 pressure sores. Quantitative microbiology clearly has a valid role to play in wound management since numerous studies have shown that it can reliably predict the risk of infection and the probability of wound healing. However, the need to quantify bacteria by performing tissue biopsy, which is invasive, potentially traumatic to the patient, and nonroutine, requires expert manipulation, and creates an increased workload for the microbiology laboratory, is debatable. Noninvasive procedures such as the velvet pad technique and the quantitative swab are also able to provide similar information, and, whether the investigation is quantitative or semiquantitative, a correlation with deep tissue biopsy results has been demonstrated.

Qualitative microbiology: significance of specific microorganisms. The effect of specific types of microorganisms on wound healing has been widely published, and although the majority of wounds are polymicrobial, involving both aerobes and anaerobes, aerobic pathogens such as S. aureus, P. aeruginosa, and beta-hemolytic streptococci have been most frequently cited as the cause of delayed wound healing and infection (39, 58, 59, 81, 94, 146, 149, 216, 217, 238). As a specific example, S. aureus is considered to be the most problematic bacterium in traumatic, surgical, and burn wound infections (96, 123, 154, 175, 180), primarily based on the knowledge that its incidence is high in these, and other, types of wound (25, 27, 180). However, although polymicrobial wounds are frequently colonized with S. aureus, a correlation between the presence of this particular pathogen and wound infection is lacking (25, 28, 98).

As long ago as 1918, the prestigious team of Almroth Wright, Alexander Fleming, and Leonard Colebrook (247) reported that a surgical wound could not be successfully closed if a hemolytic Streptococcus pyogenes strain was present. More recently, Robson and Heggers (204) singled out the beta-hemolytic streptococcus as being the only bacterium that is capable of causing infection at levels significantly lower than 105 CFU/g of tissue. Similarly, at a consensus meeting of the European Tissue Repair Society and the European Wound Management Association in 1998, a general opinion was that the presence of beta-hemolytic (group A) streptococci or P. aeruginosa in a chronic wound was an indicator of the need for antimicrobial therapy (135). Although the presence of such microorganisms frequently raises concern among health care practitioners, their identity as the etiological agent in wound infection or delayed healing can be confirmed only if they are present as a pure monomicrobial flora. In two studies involving the microbiology of cutaneous abscesses, S. aureus was present as a pure culture in 24 to 29% of the infections (41, 158). Elsewhere, S. pyogenes and S. aureus have been reported as being the sole pathogens in some cases of necrotizing fasciitis (199), and pure isolates of unusual pathogens have also been isolated from bite wound infections (67). Although other studies have identified specific microorganisms as being responsible for delayed wound healing or wound infection, clarity regarding their existence as a mono- or polymicrobial population is unclear (59, 179), and some studies used selective culture media to isolate specific microorganisms, which is likely to have biased the results (198, 216). Contrary to widespread published references to the involvement of specific microorganisms in wound healing, other investigators have demonstrated that the resident microflora has little effect on the outcome of wound healing (4, 70, 80, 95, 98, 213). Based on this collective evidence, the role of specific microorganisms in many types of infected wound is still uncertain.

It is not possible to differentiate between pathogenic (causative) and nonpathogenic species in polymicrobially infected wounds (97), and Armstrong et al. (8) commented that the presence of a pathogen in a mixed-culture infection does not necessarily establish that particular microorganism as the etiologic agent. Consequently, diagnosis of infection in polymicrobially infected wounds should be based primarily on clinical signs, such as heat, pain, erythema, edema, suppuration, and fever; microbiological results may be helpful but can often be misleading, especially with polymicrobially infected wounds containing numerous potential pathogens. However, when clinical signs of infection are less evident, as is often the case in diabetic foot ulcers, greater emphasis may have to be placed on microbiological results. In a study of the bacteriology of chronic leg ulcers in 52 patients, Trengove (237) reported that no single microorganism or group of microorganisms was more detrimental to wound healing than any other (inclusive of S. aureus, P. aeruginosa, beta-hemolytic streptococci, anaerobes, and coliform bacteria). However, a significantly lower probability of healing was observed if four or more bacterial groups were present in any ulcer (237), and this indicates that microbial interactions may have induced an enhanced pathogenic effect. Similarly, Bowler and Davies (28) reported a greater diversity of microorganisms in infected leg ulcers than in noninfected leg ulcers (means of 5.1 and 3.6 isolates per wound, respectively). These observations support an earlier view of Kingston and Seal (122), who argued that all species associated with a microbial disease should be considered potentially synergistic, rather than a single species being causative, as is commonly perceived.

Aerobic pathogens such as S. aureus, P. aeruginosa, and beta-hemolytic streptococci are recognized for their ability to produce potentially destructive virulence factors (101), and the clinical effects associated with clostridial exotoxins (65) are also widely acknowledged. However, many of the nonsporing gram-negative anaerobes that are often abundant (yet often "invisible") in wounds also possess a wide variety of virulence factors that may impair wound healing. Bacteroides, Prevotella, and Porphyromonas species are capable of expressing adhesion factors (e.g., capsular polysaccharide, fimbriae, and hemagglutinin), tissue-damaging exoenzymes (e.g., proteases, collagenase, hyaluronidase, fibrinolysin, gelatinase, elastase, and chondoitin sulfatase), and antiphagocytic factors (e.g., capsule, short-chain fatty acids, and immunoglobulin A [IgA], IgM, and IgG proteases) (65), all of which may contribute to the impairment of wound-healing processes. In association with aerobic microorganisms, the pathogenic potential of some gram-negative anaerobes is often increased, and, consequently, the combined effects of aerobes and anaerobes in wounds may produce a pathogenic effect that cannot be achieved by one type of microorganism alone.

Microbial synergy may increase the net pathogenic effect and hence the severity of infection in several ways: (i) oxygen consumption by aerobic bacteria induces tissue hypoxia and a lowering of the redox potential, which favors the growth of anaerobic bacteria; (ii) specific nutrients produced by one bacterium may encourage the growth of fastidious and potentially pathogenic cohabiting microorganisms; and (iii) some anaerobes are able to impair host immune cell function and thus provide a competitive advantage to themselves and other, cohabiting microorganisms.

Many investigators have recognized that some fastidious anaerobes require specific nutrients for growth and that this has been indirectly associated with enhanced virulence. S. aureus promotes the growth of a vitamin K-dependent strain of Prevotella melaninogenica in vitro (155), and the pathogenicity of P. melaninogenica in gingivitis has been related to the presence of vitamin K produced by a cohabiting bacterium (145). Similarly, Ingham et al. (114) observed that the antiphagocytic activity in P. melaninogenica was expressed only in the presence of hemin and vitamin K provided by cohabiting microorganisms. In the same study, the incorporation of metronidazole in an in vitro phagocyte-polymicrobial model led to the elimination of anaerobes and subsequent increased uptake of aerobic bacteria by phagocytes. Consequently, the loss of antiphagocytic activity following metronidazole treatment facilitated the exclusion of aerobic bacteria also. These observations indicate that infection may be resolved by eliminating a critical component of a microbial population and hence disrupting aerobic-anaerobic interactions.

Hemin derived from hemoglobin is an essential growth factor for black-pigmented gram-negative anaerobes, and a correlation between virulence in Porphyromonas gingivalis and the degree of pigmentation of the bacterium on blood agar has been recognised (157). Black colonies grown in the presence of excess hemin were pathogenic for mice, but in the absence of hemin they were nonpathogenic. Similarly, Bowler (26) demonstrated the ability of S. aureus to enhance the growth and pigmentation of Prevotella loescheii and P. gingivalis in vitro (Fig. 1). The aerobe-anaerobe combinations were isolated from the same infected leg ulcers, and it is likely that the S. aureus induced growth and virulence in the pigmenting anaerobe by providing an essential growth factor. Sterile fluid culture filtrates of the aerobe were not able to induce a similar effect. In the absence of S. aureus, the anaerobes either failed to grow or grew as pinpoint, nonpigmented colonies on an enriched blood agar medium. Other facultative bacteria such as E. coli and Klebsiella pneumoniae were shown to be capable of inducing a similar effect, but to a lesser extent than S. aureus.


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FIG. 1.   Growth of P. loescheii in the presence of S. aureus.

Elsewhere, K. pneumoniae was reported to be instrumental in enhancing virulence in P. melaninogenica by providing succinate as an essential growth factor (138, 155). Succinate is an important short-chain fatty acid (SCFA) that is produced by both aerobic and anaerobic bacteria (e.g., E. coli, K. pneumoniae, Bacteroides spp., and Prevotella spp.); it accumulates in anaerobe-dominated infected sites (236) and inhibits the chemotaxis and phagocytosis of E. coli (208) and S. aureus (190). Mayrand and McBride (155) also demonstrated that succinate production by K. pneumoniae is enhanced in the presence of glucose. This observation may be indirectly related to the close correlation between blood glucose levels and wound infection rates in diabetic patients, whose probability of infection is five times greater than in nondiabetic patients (210). Neutrophil chemotaxis, phagocytosis, intracellular killing mechanisms, and serum opsonic activity are impaired in diabetic patients (9, 177) and oxidative and nonoxidative antimicrobial mechanisms in neutrophils are also impaired by SCFAs (178). Thus, it can be hypothesized that high levels of glucose in chronic wound fluid will stimulate the production of succinate in gram-negative bacteria, which will subsequently impair host cell function and render the host more susceptible to infection. Furthermore, since subcutaneous insulin infusion has been associated with improved wound healing, meticulous blood glucose control is considered to be essential in treating diabetic wounds (209). High levels of succinic acid (>30 mmol) have been measured in clinical abscesses (87), and neutrophil migration and activity have been impaired in vitro in the presence of >20 mmol of succinate. Succinate is also more active at acidic pH, and therefore the hypoxia and low pH associated with many chronic wounds will facilitate succinate activity and hence exacerbate impaired neutrophil function.

Thus, the quantitative and qualitative aspects of wound microbiology are critical determinants in the development of infection. Assuming that the qualitative microbiology remains constant, the probability of wound infection increases as the microbial load increases, up to a critical level where infection or a failure to heal is considered by some to be almost inevitable. In theory, the presence of S. aureus and a pigmenting gram-negative anaerobe in a wound is likely to be more detrimental than the presence of a similar quantity of S. aureus alone. In the absence of facultative bacteria that can provide the necessary growth factor, a pigmented gram-negative anaerobe may be unable to proliferate and thus to express its full pathogenic potential. Therefore, the composition of the polymicrobial wound flora is likely to be more important than the presence of specific pathogens, since this will determine whether pathogenic interactions are likely to occur.

A third critical factor in wound healing and infection is the efficacy of the host immune response in dealing with wound microflora. Local environmental factors such as tissue necrosis, hypoxia, and ischemia impair immune cell activity in a wound, as do diabetes mellitus, chronic granulomatous disease, and other immune deficiencies. As discussed above, microorganisms can also participate in compromising the immune response, and in these situations, the patient is at greater risk of infection. Only by assessing the host and microbial factors collectively can the probability of wound infection be addressed.


MICROBIOLOGICAL ANALYSIS OF WOUNDS
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In clinical practice, the presentation of a devitalized acute or chronic wound or a clinically infected wound is likely to prompt a practitioner to sample the wound for microbiological analysis. However, from a wound management perspective, there is little consensus regarding whether sampling is relevant, when and how a wound should be sampled, how a specimen should be transported to the laboratory, and what analyses should be requested. Confusion also exists in view of the fact that health care practitioners often consider a microbiological report to provide definitive information on whether a wound is infected (76, 173), and the provision of an antibiogram for a particular pathogen can often be misleading and prompt unnecessary treatment.

The aim of the following sections is to clarify current controversies in wound sampling and discuss the role of the health care practitioner and the microbiology laboratory in achieving clinically relevant outcomes.

Wound-Sampling Methods

In generalized terms, the quantitative and qualitative microbiology of wounds can be investigated by sampling either wound tissue or wound fluid.

Wound tissue sampling. The acquisition of deep tissue during biopsy following initial debridement and cleansing of superficial debris is recognized as being the most useful method for determining the microbial load and the presence of invasive pathogens (76, 173, 235). Tissue is obtained aseptically and is then weighed, homogenized, serially diluted, and cultured on selective and nonselective agar media under aerobic and anaerobic conditions to provide quantitative and qualitative information. Superficial, devitalized tissue removed by curettage, which is often used in the management of diabetic foot ulcers, may also be investigated for microbial content. Another technique involving dermabrasion has recently been described that enables the acquisition of deeper tissue without being as invasive as the biopsy method (181).

Wound fluid sampling. When a copious volume of wound fluid exists, sampling by needle aspiration can be employed. This technique may also be used to sample deeper pockets of fluid beneath superficial debris and is the most useful procedure for sampling purulent fluid from intact cutaneous abscesses. If the technique is performed with strict aseptic techniques, the target site can be located in a relatively nontraumatic way and without any significant exogenous contamination. In cavity wounds such as some pressure sores, irrigation with sterile saline and gentle massaging may be performed to provide fluid for aspiration.

Wound swabbing most frequently involves the use of a cotton-tipped swab to sample superficial wound fluid and tissue debris, and this enables a semiquantitative and qualitative analysis of the wound microflora. An alginate-tipped swab can also be used to perform a fully quantitative analysis, since the swab will dissolve and release all associated microorganisms when transferred to an appropriate diluent. Despite its widespread use, there is debate over the value of the swab sampling technique and the value of cleansing a wound before swabbing is performed.

A variety of other techniques, including the dry and presoaked velvet pad, filter paper disks, and cylinder scrubbing, have also been used to sample superficial wound fluid for microbiological analysis.

The plethora of sampling methods available to the practitioner creates a considerable problem in the microbiological management of wounds, since all are reputed to have benefits and there is no single, universally accepted method. Consequently, debate and controversy continue regarding the type of sample required to provide the most meaningful data, the superiority of one sampling procedure compared with another in terms of microbial recovery (
116, 188, 211, 214), and the relevance of wound cleansing prior to sampling (98). The lack of consensus regarding the correct way to prepare and sample a wound is a point of concern within the wound care profession, and results generated by the microbiology laboratory may be misinterpreted and encourage inappropriate treatment.

Without question, tissue biopsy or excision is considered the most appropriate sampling method for identifying wound infection and the causative pathogens. From a quantitative perspective, this method is perhaps most beneficial in determining the optimal time point for skin grafting and surgical wound closure (202). From a qualitative perspective, excised, uncontaminated tissue from infected sites or exudate aspirated from a closed or open lesion is considered to be most appropriate for isolating causative microorganisms. However, the validity and value of a single biopsy specimen, particularly in chronic wounds, is debatable. Although variability in both tissue counts and microbial isolates obtained from different parts of chronic wounds has been observed (215), comparable counts were reported in wound fluid samples of known volume taken from central and peripheral parts of leg ulcers in another study (99). Although the merits of acquiring deep tissue for microbiological analysis are widely acknowledged, the procedure is not routinely available for the majority of wound types (68) and its use is restricted primarily to acute and surgical situations where excision, biopsy, or aspiration is urgently required. Particularly in slow-healing or nonhealing chronic wounds that require frequent and long-term care, tissue biopsy is of minimal value since it requires expert surgical technique, is nonroutine, and is potentially traumatic to the patient. For these reasons, the use of more conventional and readily available sampling methods must be considered.

Aspirates of purulent fluid should always be used for analysis if possible, since the clinical presentation is indicative of a focus of infection and a specimen can be obtained without trauma to the patient and with minimal invasion. However, Johnson et al. (116) demonstrated superior isolation of anaerobic bacteria from infected diabetic foot ulcers by a swab technique than by a needle aspiration technique (83 and 41% isolation, respectively, of a total of 103 isolates from 43 wounds).

Although the value of acquiring superficial swab samples has been seriously questioned, the procedure is simple, inexpensive, noninvasive and convenient for the majority of wounds. Swab sampling has been challenged on the basis that the superficial microbiology does not reflect that of deeper tissue (88, 188) and that subsequent cultures do not correlate with the presence of pathogenic bacteria (47). Also, if a swab sample is taken inappropriately (i.e., prior to wound cleansing and removal of devitalized superficial debris), the resulting culture has been considered to reflect only surface contamination (211) and provide misleading or useless information (76). Papasian and Kragel (183) suggested that if vital tissue could not be sampled, a specimen should not be collected at all and the patient should be treated empirically. A misconception regarding superficial sampling is that surface swabs will isolate only a small number of anaerobes and that deeper specimens are required to demonstrate the true microflora (127). However, since the majority of wounds are contaminated with endogenous microorganisms from the external environment, any microorganisms present in deeper tissue are also likely to be present in the superficial debris. Consequently, it is most likely that superficial wound fluid and tissue debris display a full spectrum of the wound aerobic and anaerobic microflora, some of which may be involved in pathogenesis and some of which may not be. Also, since many endogenous anaerobes can withstand prolonged periods of exposure to air (17, 26, 99, 142), they will survive in superficial tissue and multiply in devitalized and hypoxic or anoxic tissue. For this reason, and because anaerobes constitute a significant proportion of the microflora in both acute and chronic wounds, investigation for the presence of anaerobes is as important as (although more difficult than) investigation for aerobes. Studies by Bowler and Davies (27) have demonstrated the efficacy of the swab sample in isolating anaerobes from a variety of acute and chronic wounds.

Thus, there are arguments to support the use of the swab sample as a useful method for routinely assessing the microbiology of appropriate wounds. It is the opinion of the authors that for routine management, only wounds that are clinically infected or those that have no clinical signs of infection but are deteriorating (e.g., diabetic foot ulcers) or have a long history of failure to heal (primarily chronic wounds) should be sampled for microbiological analysis. In these situations, the surface swab sample can provide useful data regarding the presence of potential pathogens, the diversity of microorganisms involved, and, consequently, an indication of the probability of microbial synergy. However, indiscriminate swabbing of wounds that do not require sampling causes an unnecessary drain on labor and financial resources, and consequently selective application for wounds that are likely to benefit is a prerequisite. A swab sample can also provide a semiquantitative estimation of the microbial load (e.g., light growth to heavy growth, or >105 CFU/ml), which is considerably easier to perform than a fully quantitative analysis. A correlation between semiquantitative swab data and quantitative biopsy data has previously been demonstrated (8, 23, 132, 139, 235, 239).

Although wound cleansing is considered necessary to avoid the pointless exercise of sampling superficial devitalized tissue (47, 88, 188, 211), Hansson et al. (98) observed no difference in the qualitative and quantitative microbiology of leg ulcers, whether or not they were cleansed prior to sampling with absorbent disks. Additionally, if vital tissue at the wound base cannot be obtained, swab sampling of an uncleansed wound surface will comprehensively demonstrate the aerobic and anaerobic microflora, any component(s) of which may be involved in wound infection. However, notification that a specimen had been obtained from an uncleansed wound by a swab procedure would be beneficial to the microbiology laboratory, since the diversity of microflora in such a sample is likely to render the isolation and identification procedures more problematic and complex. The subsequent reporting of a "mixed culture" is often interpreted as being associated with a poorly sampled or dirty wound with no pathogens, when a more detailed explanation of the microorganisms involved may provide clues to potential polymicrobial interactions. This aspect is discussed in more detail in "Reporting of microbiological results" (below).

An important factor to consider when sampling a wound for microorganisms is the administration and route of antimicrobial therapy. If a patient is receiving treatment, microbial isolation from swab samples is likely to be significantly influenced by topical antimicrobial agents (particularly in chronic, ischemic wounds) whereas the microflora of deep tissue is more likely to be influenced by systemic antibiotic therapy. In summary, superficial swabbing can be justified as a simple procedure for assessing the microflora of wounds that are clinically infected or failing to heal. Semiquantitative analysis will provide a good indication of the microbial load, and the qualitative analysis, although complex, will provide an indication of the diversity of microorganisms and potential for microbial synergy. A request for both aerobic and anaerobic microbiological investigation is an important aspect of obtaining the information required to guide appropriate antibiotic therapy, although a broad categorization for anaerobic bacteria (e.g., pigmenting anaerobes, anaerobic streptococci) is likely to be adequate in most cases.

Specimen Transport

Following the acquisition of wound fluid or tissue for microbiological analysis, prompt delivery of the specimen to the laboratory is considered to be of utmost importance (32), particularly if anaerobic bacteria are being investigated. Aspirates of purulent fluid and tissue samples are considered to be preferable to swabs (32, 119) because they will maintain the conditions required to sustain microbial viability (i.e., a moist and reduced environment) if processed promptly. However, prereduced commercially available transport media offer advantages if specimen culture is delayed beyond 1 to 2 h after isolation. Since swab samples are susceptible to desiccation and oxygen exposure, a prereduced, nonnutritive transport medium is essential to maintain the viability of both aerobic and anaerobic microorganisms on cotton swabs.

Although anaerobic bacteria are commonly perceived to die in air, they have been shown to survive in mixed cultures over extended periods (24 h) (99, 142) and various anaerobes have been shown to survive in clinical specimens despite delayed processing (17). Also, pure cultures of various anaerobic bacteria (including sporing and nonsporing gram-positive and gram-negative bacteria) can survive in air for up to 72 h and can resume growth when reintroduced into an anaerobic environment (26). These observations correlate with those of Bowler and Davies (27), who isolated 157 anaerobes from 106 acute and chronic wounds, the majority of which had been swab sampled and the swabs had been transferred to the laboratory in a standard transport medium. Similarly, in a study that compared the efficacy of three commercially available transport media in facilitating microbial recovery from purulent wounds, a time delay between collection and plating did not affect the isolation of aerobic and anaerobic microorganisms in any of the systems (156). Thus, despite the obvious merits of specialized anaerobic transport media (116), transportation of a moist swab sample to the laboratory in a prereduced transport medium offers a cheap and effective method to enable the culture of both aerobic and anaerobic microorganisms (provided that the isolation and identification methods are adequate). For specimens that cannot be transferred to the laboratory within 1 to 2 h, storage at room temperature is considered to be appropriate for the maintenance of aerobic and anaerobic microorganisms; elevated temperatures may cause differential growth or death of some microorganisms, and lower temperatures will cause increased oxygen diffusion (225).

Analysis of Wound Specimens

On arrival at the laboratory, a specimen will be presented to the microbiologist as a tissue, aspirate, fluid, or swab sample that may or may not be accompanied by a clinical description of the wound. Information regarding the type of wound (e.g., surgical, traumatic, leg ulcer, or pressure ulcer), the position of the wound, clinical signs of infection, presence of necrosis, associated malodor, and antimicrobial therapy will greatly assist the microbiologist in predicting the microorganisms that are most likely to be involved and therefore the types of culture media and complementary analyses that should be used. For example, a purulent and malodorous wound fluid aspirate would be indicative of the presence of anaerobic bacteria and gas liquid chromatography (GLC) analysis would most probably provide rapid confirmation of potentially pathogenic anaerobes and facilitate early and appropriate antibiotic treatment. Similarly, the description of a wound associated with colorectal surgery or a sacral pressure ulcer is indicative that the wound is likely to be soiled with fecal microorganisms and therefore that mixed aerobes and anaerobes are likely to be present. If a wound displays clinical signs of infection, the microbiologist is expected to identify the microorganism, or group of microorganisms, most likely to be involved. Also, the provision of information regarding current antibiotic treatment may assist the microbiologist in determining which microorganisms are most likely to persist in a wound and therefore guide appropriate culturing procedures.

For the practitioner caring for a patient's wound, an early indication of the microorganisms present and guidance about the most appropriate antibiotic treatment (if considered to be necessary) are of primary importance. With the benefit of knowledge of the wound status, the role of the microbiologist is to perform a series of investigations that will yield prompt and meaningful data. Since microbial culture and antibiotic sensitivity results cannot be generated in less than 48 h (and may, on occasion, take considerably longer), a number of rapid investigations must be considered at the outset.

Gas-liquid chromatography for malodorous specimens. As previously discussed, an offensively malodorous wound specimen is indicative of the presence of anaerobic bacteria (29). Since these microorganisms can be characterized on the basis of the SCFAs produced as end products of metabolism, rapid determination of the presence of potentially pathogenic anaerobic bacteria can be performed by direct GLC analysis on the specimen (87). However, specimens that can benefit from this type of analysis are normally restricted to purulent drainage from enclosed abscesses.

Although GLC is a valuable method for rapidly identifying anaerobic bacteria in clinical specimens, the costs involved with such equipment have prevented its use as a routine procedure in microbiology laboratories.

Gram stain. Despite being used for over a century, Gram's stain is still the most important stain in microbiology (192) and is widely used as a rapid technique for guiding antibiotic therapy in life-threatening infections such as bacterial meningitis. However, the value of the Gram stain as a diagnostic tool is debatable. Although its use in the evaluation of tracheal aspirate samples has been reported as insufficiently reliable to guide antibiotic selection (172), the value of the Gram stain has been recognized in diagnosing the cause of peritonitis in continuous ambulatory peritoneal dialysis patients (21), in predicting skin catheter-related bacteremia (137), and in detecting bacterial vaginosis in pregnant women (231).

In wound management, Gram staining of a known volume of tissue biopsy specimen homogenate has been used to rapidly estimate the microbial load of a wound and thus facilitate successful closure of surgical wounds (102). Also, the presence of microorganisms in a Gram-stained smear prepared from a wound swab has been shown to consistently reflect a microbial load of >= 106 organisms isolated by a quantitative swab technique from open burn wounds (139). However, in diabetic foot infections and burn wounds, both of which involve complex microbial ecosystems, a poor correlation between Gram stain and culture results from deep tissue biopsy specimens has been reported (229).

The value of Gram's stain in facilitating early and appropriate treatment of a wound infection by the clinician is questionable and is primarily dependent on the type of wound. Meislin et al. (159) reported that the Gram stain reliably indicates sterile and mixed abscesses, as well as those containing pure S. aureus. Similarly, this procedure may also facilitate identification of the etiological agent of wound infection following clean surgery, where there is a higher probability of one microorganism being involved (e.g., clusters of gram-positive cocci). However, in most other wound types that are characterized by a complex aerobic-anaerobic microflora, the Gram stain has little value, although the combined presence of leukocytes and bacteria is likely to be a good indicator of infection, as reported by Hussey et al. (112) in studying rapid diagnostic tests for intra-amniotic infection. With the exception of gram-positive spore-forming anaerobes such as Clostridium perfringens, differentiation between aerobic and anaerobic bacteria is difficult and is further complicated by the fact that many gram-positive anaerobes become gram variable on exposure to oxygen (117).

Culture of wound specimens. Routine analysis of wound specimens normally involves the use of selective and nonselective agar media to culture aerobic bacteria and yeasts and, if a specimen is purulent and/or malodorous, anaerobic bacteria also. Although anaerobic bacteria often constitute a significant proportion of the total microflora in wounds, their culture and isolation is prolonged and more resource demanding than investi